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ERX3777113: GridION sequencing
1 OXFORD_NANOPORE (GridION) run: 41,666 spots, 16.8M bases, 15.4Mb downloads

Submitted by: xylab
Study: Aerosol antibiotic resistance gene dissemination among hospital departments by culture-facilitated comparative metagenomics
show Abstracthide Abstract
Genes make microorganisms resistant to antibiotics are overwhelmingly present in environments, and those in the air seem to consistently worsen human health, especially in built-in hospitals. In this study, we sampled two distinct seasonal solid-, liquid- and gaseous-state samples in a large occupied hospital, and mainly aim to study the temporal and spatial micro-ecology and antibiotic resistance gene (ARG) distribution patterns within hospital settings using culture-facilitated comparative metagenomics in combinations with other widely applied methods.
Sample: cultural isolates in hospital setting - emergency hall
SAMEA6436639 • ERS4202831 • All experiments • All runs
Library:
Name: unspecified
Instrument: GridION
Strategy: WGS
Source: GENOMIC
Selection: other
Layout: SINGLE
Construction protocol: SQK-RBK-004
Runs: 1 run, 41,666 spots, 16.8M bases, 15.4Mb
Run# of Spots# of BasesSizePublished
ERR377516641,66616.8M15.4Mb2020-01-10

ID:
9851801

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